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Issue: Newsletter 8 | November 1, 2025

Randomised Controlled Trials

Citation of Articles PICO Main Results Risk of Bias
Burdet C, Saïdani N, Dupieux C, Lemaignen A, Canouï E, Surgers L, et al. Cloxacillin versus cefazolin for meticillin-susceptible Staphylococcus aureus bacteraemia (CloCeBa): a prospective, open-label, multicentre, non-inferiority, randomised clinical trial. Lancet. 2025 Oct 17; doi:10.1016/S0140-6736(25)01624-1

• Editorial commentary:
Kao CM, Fritz SA. Treatment of MSSA bacteraemia: a call for a personalised approach. Lancet. 2025 Oct 17; doi:10.1016/S0140-6736(25)01844-6
P: 292 adults (mean age 62.7 years; 74% male) with methicillin-susceptible Staphylococcus aureus (MSSA) bacteraemia (without CNS infection or intravascular implant) recruited from 21 hospitals in France.
I: Cefazolin 25–50 mg/kg IV every 8 hours for 7 days (followed by investigator’s choice; total ≥14 days).
C: Cloxacillin 25–50 mg/kg IV every 4–6 hours for 7 days (followed by investigator’s choice; total ≥14 days).
O: Composite primary outcome of sterile blood cultures at day 3 (day 5 for endocarditis), survival, and clinical success at day 90; safety outcomes including serious adverse events and acute kidney injury.
Cefazolin achieved non-inferior efficacy to cloxacillin for the composite primary endpoint (75% vs 74%; treatment difference –1%, 95% CI –11 to 9; p = 0.012). Serious adverse events were significantly fewer with cefazolin (15% vs 27%; p = 0.010), and acute kidney injury occurred far less often (1% vs 12%; p = 0.0002). These findings indicate cefazolin provides comparable clinical effectiveness with improved safety and tolerability. Moderate risk: Open-label design may introduce performance and detection bias, although objective microbiological and mortality endpoints reduce this risk. Randomization and stratification by centre and infection source enhance internal validity. Exclusion of ~7% post-randomization and investigator-selected continuation therapy may introduce minor attrition and performance bias. Overall, evidence reliability is good with limited blinding-related concerns.
Haidara FC, Adubra L, Abdou M, Alber D, Ashorn U, Cheung YB, et al. Mass administration of azithromycin to infants in Mali to reduce mortality. N Engl J Med. 2025 Oct 15;393:1498–1508. doi:10.1056/NEJMoa2504644 P: 149,090 infants aged 1–11 months from 1151 villages in Mali, West Africa (82,600 person-years of follow-up).
I: (1) Twice-yearly azithromycin (20 mg/kg orally at two quarterly visits from Jan–Jun, placebo Jul–Dec); (2) Quarterly azithromycin (20 mg/kg every 3 months).
C: Placebo every 3 months.
O: Primary—death within 3 months after eligibility confirmation; Secondary—adverse events and mortality among untreated children aged 12–59 months.
Mortality rates were similar across groups: 11.9 deaths per 1000 person-years (control), 11.8 (twice-yearly azithromycin; incidence rate ratio [IRR] 1.00, 95% CI 0.83–1.19), and 11.3 (quarterly azithromycin; IRR 0.93, 95% CI 0.75–1.15). No significant mortality reduction was observed with either dosing schedule. Adverse events were rare and comparable among groups. Mortality among older, untreated children did not differ by group. Overall, azithromycin mass administration did not lower infant or child mortality. Low risk: Large, cluster-randomized design with village-level randomization and high follow-up completeness strengthens validity. Blinding of intervention (placebo-controlled) minimizes performance and detection bias. Objective mortality outcomes reduce measurement bias. Potential minor bias from unequal cluster allocation (3:4:2 ratio) and community-level confounders, but overall robust and generalizable evidence.
Ayele H, Jo J, Begum K, Hu C, Le TM, Alam MJ, et al. A randomized phase 1 study investigating gut microbiome changes with moxifloxacin vs. oral vancomycin: implications for Clostridioides difficile risk. J Infect Dis. 2025 Oct 13;jiaf512. doi:10.1093/infdis/jiaf512 P: Healthy adult volunteers (aged 18–40) in a phase 1 non-blinded randomized trial comparing moxifloxacin to vancomycin; exact number of participants not clearly stated in the abstract.
I: Moxifloxacin for 10 days.
C: Vancomycin for 10 days.
O: Microbiome (16S rRNA sequencing) and bile acid metabolomic changes.
Moxifloxacin caused minimal overall microbial disruption but did induce transient reduction in Clostridiales and secondary bile acids (Day 0 to Day 7). Vancomycin caused more marked and prolonged disruption: increased Proteobacteria, decreased Clostridiales, and longer suppression of secondary bile acids. These findings suggest a shorter window of gut vulnerability with moxifloxacin relative to vancomycin. Moderate risk: Lack of blinding (open label), healthy volunteer sample limiting applicability to patient populations, and unclear sample size undermine external validity. Use of objective microbiome/metabolome outcomes strengthens internal validity but small size likely limits generalizability.
Mingchay P, Kawkitinarong K, Torvorapanit P, Ohata PJ, Suwanpimolkul G, et al. Effectiveness of nebulized bronchodilator–enhanced sputum induction in Thai patients with presumed pulmonary tuberculosis: a randomized controlled trial (NeB-TB Trial). Clin Infect Dis. 2025 Oct 23; doi:10.1093/cid/ciaf580 P: 204 adults with presumed pulmonary TB and negative Xpert MTB/RIF Ultra results or inadequate sputum production, enrolled at King Chulalongkorn Memorial Hospital, Thailand.
I: Bronchodilator-enhanced sputum induction (nebulized bronchodilator plus 3% hypertonic saline).
C: Conventional sputum induction (3% hypertonic saline alone).
O: Primary—TB diagnosis by Xpert MTB/RIF assay; Secondary—mycobacterial culture positivity, need for bronchoscopy, adverse events, time to treatment initiation.
Bronchodilator-enhanced induction significantly increased TB detection (30.1% vs 17.8%; RR 1.68, 95% CI 1.01–2.80; NND 4 vs 6), showed a trend toward higher culture positivity (RR 1.49, 95% CI 0.93–2.41), reduced need for bronchoscopy (RR 0.41, 95% CI 0.15–1.12), fewer adverse events, and fewer induction attempts. Time to treatment initiation was significantly shorter (median 4.5 vs 14 days; p < 0.01). Subgroup analysis indicated pronounced benefit among outpatients (RR 1.86, 95% CI 1.00–3.48). Low-to-moderate risk: Randomized design reduces selection bias; objective primary outcome (Xpert MTB/RIF) limits detection bias. Open-label intervention could introduce performance bias, but effects on lab-based outcomes are minimal. Single-center study and short follow-up may limit generalizability. Adequate sample size and balanced groups strengthen internal validity.
McCann N, Vicentine MP, Ebrahimi N, Greenland M, Angus B, Collins AM, et al. Safety, efficacy, and immunogenicity of a Salmonella Paratyphi A vaccine. N Engl J Med. 2025 Oct 29;393(17):1704–14. doi:10.1056/NEJMoa2502992 P: 72 healthy U.K. adults (median age 32 years; 46% women) enrolled in a controlled human infection model for Salmonella Paratyphi A infection.
I: Two oral doses of live attenuated S. Paratyphi A vaccine (CVD 1902), 14 days apart
C: Placebo
O: S. Paratyphi A infection within 14 days after oral challenge; safety; immunogenicity
CVD 1902 vaccine significantly reduced S. Paratyphi A infection rates compared to placebo (21% vs 75%; P<0.001), corresponding to 73% vaccine efficacy (95% CI, 46–86) in the intention-to-treat analysis and 69% (95% CI, 42–84) per-protocol. The vaccine induced strong serum IgG and IgA O-antigen responses, absent in placebo recipients. Adverse event profiles were similar between groups, with no vaccine-related serious adverse events. Low risk: The randomized, double-blind, placebo-controlled design minimizes selection and performance bias. Controlled challenge and full follow-up strengthen validity. However, use of a small, healthy adult sample and artificial challenge model may limit generalizability to broader, real-world populations.
Lucinde RK, Gathuri H, Mwaniki P, Orindi B, Otieno EO, Mwakio S, et al. A pragmatic trial of glucocorticoids for community-acquired pneumonia. N Engl J Med. 2025 Oct 29; doi:10.1056/NEJMoa2507100

• Editorial:
Kwizera A, Dünser MW. Glucocorticoids for pneumonia in Africa — old therapy, new context. N Engl J Med. 2025 Oct 29; doi:10.1056/NEJMe2514533
P: 2180 adults (median age 53 years; 46% women) hospitalized with community-acquired pneumonia (CAP) in 18 public hospitals in Kenya
I: Oral low-dose glucocorticoids for 10 days plus standard care
C: Standard care for CAP
O: Death from any cause at 30 days after enrollment
Adjunctive oral low-dose glucocorticoids for 10 days reduced 30-day all-cause mortality compared with standard care alone (22.6% vs 26.0%; HR 0.84, 95% CI 0.73–0.97, P=0.02). Adverse and serious adverse events occurred at similar frequencies between groups, with only 0.5% experiencing glucocorticoid-related serious events. The findings suggest mortality benefit without increased safety risk in a low-resource setting. Moderate risk: The pragmatic, open-label design could introduce performance and detection bias. However, large sample size, randomization, and consistent outcome assessment strengthen validity. Lack of blinding and variable care standards across 18 hospitals may limit internal control and generalizability.
The SuDDICU Investigators for the Australia and New Zealand Intensive Care Society Clinical Trials Group and the Canadian Critical Care Trials Group. Selective decontamination of the digestive tract during ventilation in the ICU. N Engl J Med. 2025 Oct 29; doi:10.1056/NEJMoa2506398 P: 9289 critically ill adults undergoing mechanical ventilation in 26 ICUs in Australia and Canada (plus 10,711 for ecological assessment).
I: Selective decontamination of the digestive tract (SDD) with topical oral and gastric antimicrobials during ventilation plus 4 days of intravenous antibiotics.
C: Standard ICU care without SDD.
O: In-hospital death within 90 days; secondary outcomes included bloodstream infections, antibiotic resistance, adverse events, and days alive and free of ventilation or hospitalization.
SDD did not significantly reduce in-hospital mortality at 90 days compared with standard care (27.9% vs 29.5%; OR 0.93, 95% CI 0.84–1.05, P=0.27). It reduced new bloodstream infections (4.9% vs 6.8%) and antibiotic-resistant organism cultures (16.8% vs 26.8%), but non-inferiority for ecological resistance outcomes was not confirmed. Adverse and serious adverse events were rare and comparable between groups. Overall, SDD improved some microbiologic outcomes but failed to show a mortality benefit. Low-to-moderate risk: The cluster-randomized, multicenter design strengthened validity and reduced contamination bias. The open-label approach could introduce performance bias, and differing infection-control standards may have affected consistency. Non-inferiority ecological analyses limit interpretation of resistance findings. High sample size and standardized outcome assessment reduce attrition and detection bias.

Target Trial Emulation

Beydon M, Nguyen Y, Roux O, Dokmak S, Bert F, Ronot M, et al. Short versus long-course antibiotic therapy for pyogenic liver abscess: an emulated target trial. Clin Microbiol Infect. 2025 Oct 29; doi:10.1016/j.cmi.2025.10.020

  • Summary: This retrospective study of 429 adults with pyogenic liver abscess (PLA) between 2010 and 2022 found that a short antibiotic course (≤30 days) was generally non-inferior to longer courses (>30 days) for 90-day relapse-free survival, with non-inferiority achieved in patients who underwent drainage but not in undrained patients, suggesting that shorter treatment may be sufficient for most drained cases without compromising outcomes.

Antibiotics

Gallagher JC. We cannot overcome the mediocrity of colistin. Clin Infect Dis. 2025 Oct 29; doi:10.1093/cid/ciaf592

  • Summary: Reflecting on over 20 years of clinical experience with intravenous colistimethate sodium, the author highlights its challenging use against carbapenem-resistant pathogens due to historic dosing uncertainty, pharmacokinetic limitations causing suboptimal infection site concentrations, and overlapping therapeutic and toxic thresholds, illustrating that even PKPD-guided dosing cannot fully resolve its inherent risk-benefit dilemma.

Seaton RA. Fleming’s legacy. JAC Antimicrob Resist. 2025 Oct 24;7(5):dlaf167. doi:10.1093/jacamr/dlaf167

  • Summary: Marking 2028 as the centenary of Alexander Fleming’s discovery of penicillin, this article reflects on how the antibiotic revolution transformed modern medicine—from saving war casualties to enabling complex surgeries and cancer therapy—while warning that unchecked antimicrobial resistance (AMR), exacerbated by indiscriminate antibiotic use and the potential retirement of the UK’s Fleming Fund, threatens these hard-won advances, emphasizing the urgent need for global surveillance, education, and stewardship to preserve Fleming’s legacy.

Charlier C, Souhail B, Dauger S, Woerther PL, Bleibtreu A, Caseris M, et al. Antibiotic therapy in necrotizing soft tissue infections: a narrative review of the greater Paris SURFAST consortium. Crit Care. 2025 Oct 10;29:431. doi:10.1186/s13054-025-05664-5

  • Summary: This narrative review provides a practical, evidence-based framework for empirical antibiotic therapy in necrotizing soft tissue infections (NSTIs), offering a structured decision-making algorithm that accounts for infection site, healthcare versus community origin, risk factors for resistant pathogens, sepsis severity, β-lactam allergies, and vulnerable populations, while highlighting critical knowledge gaps and research priorities to guide clinicians in optimizing treatment.

Alharthi AF, Al Sulaiman K, Alotaibi S, Alqahtani R, Damfu N, Alharbi A, et al. Managing infections in burn patients: strategies and considerations for antimicrobial dosing. Eur Burn J. 2025 Oct 1;6(4):53. doi:10.3390/ebj6040053

  • Summary: This review highlights the heightened risk of infection in burn patients due to immune impairment and stresses the importance of infection prevention and management, emphasizing that profound pharmacokinetic and pharmacodynamic changes during the resuscitation and hypermetabolic phases often require careful antimicrobial dose adjustments and therapeutic monitoring to ensure effective treatment.

Christensen M, Bathum L, Kristiansen KT, Strange DG, Pinholt M, Thønnings S. Therapeutic drug monitoring of pharmacologically active ampicillin, cefuroxime, meropenem, tazobactam and piperacillin – method validation and results from one-year experience. Scand J Infect Dis. 2025 Sep 29; doi:10.1080/00365513.2025.2565726

  • Summary: This study describes the development and validation of a rapid LC-MS/MS assay for measuring the pharmacologically active, non-protein-bound fraction of key beta-lactam antibiotics (Ampicillin, Cefuroxime, Meropenem, Piperacillin/Tazobactam) and demonstrates that routine therapeutic drug monitoring in 581 mainly ICU patients revealed unexpectedly high and potentially toxic drug levels, highlighting both the accuracy of the method and the potential clinical value of TDM in optimizing beta-lactam therapy.

Orenbuch-Harroch E, Snoyman G, Nashashibi MA, Temper V, Oster Y, Grupel D, et al. Aztreonam-amoxicillin/clavulanate combination therapy against blaNDM-producing Enterobacterales infections. J Antimicrob Chemother. 2025 Oct 14; doi:10.1093/jac/dkaf379

  • Summary: This study reports that antimicrobial susceptibility testing–guided aztreonam combination therapy, particularly with amoxicillin-clavulanate, showed promising clinical efficacy—achieving a 78% cure rate in patients with NDM-producing Enterobacterales infections resistant to aztreonam monotherapy—while gradient strip-crossing methodology proved reliable for guiding therapy, suggesting a potential broad-spectrum-sparing treatment strategy for these difficult-to-treat infections.

Pyles D, Kovacic Scherrer N, Zarfoss Ponce E, Shigle AJ. Evaluation of sodium zirconium cyclosilicate usage for hyperkalaemia secondary to sulfamethoxazole/trimethoprim therapy. J Antimicrob Chemother. 2025 Oct 14; doi:10.1093/jac/dkaf380

  • Summary: This study demonstrates that sodium zirconium cyclosilicate effectively and safely lowers elevated potassium levels in patients experiencing sulfamethoxazole/trimethoprim–induced hyperkalaemia, achieving normokalaemia in most patients within 48 hours without causing hypokalaemia, supporting its use to enable continued treatment with sulfamethoxazole/trimethoprim when clinically preferred.

Müller SE, Junker S, Rehner J, Förster M, Keller A, Molano LA, et al. Comparative in vitro activity of ceftazidime-avibactam plus aztreonam and the fixed combination aztreonam/avibactam against multidrug-resistant Pseudomonas aeruginosa. J Antimicrob Chemother. 2025 Oct 13; doi:10.1093/jac/dkaf376

  • Summary: This study found that the combination of ceftazidime–avibactam plus aztreonam (CAZ/AVI + AZT) demonstrated greater in vitro efficacy against multidrug-resistant Pseudomonas aeruginosa isolates, particularly those carrying VIM-2 carbapenemases, compared to the fixed aztreonam/avibactam combination, with checkerboard assays showing additive or synergistic effects in most cases, suggesting CAZ/AVI + AZT may offer a more potent therapeutic option for these difficult-to-treat pathogens.

Lipman J, Lewis RE. The long walk to a short half-life: the discovery of augmented renal clearance and its impact on antibiotic dosing. J Antimicrob Chemother. 2025 Oct 13; doi:10.1093/jac/dkaf378

  • Summary: This review highlights augmented renal clearance (ARC) as an underrecognized phenomenon in critically ill patients—characterized by elevated creatinine clearance leading to subtherapeutic antibiotic levels—which affects 65%–80% of ICU patients, increases the risk of treatment failure and resistance, and underscores the need for therapeutic drug monitoring, predictive models, and evidence-based dosing strategies to optimize antibiotic therapy.

Mattina R, Scaglione F. Amoxicillin/clavulanate as a cornerstone of antibiotic stewardship: integrating WHO AWaRe principles, Italian recommendations, and evidence-based practice. Minerva Med. 2025 Oct 7; doi:10.23736/S0026-4806.25.09808-8

  • Summary: This Expert Opinion highlights amoxicillin/clavulanate as a first-line, narrow-spectrum antibiotic within the WHO AWaRe framework and Italian stewardship guidelines, emphasizing its broad activity against key respiratory pathogens—including β-lactamase producers—proven efficacy across common infections in adults and children, favorable tolerability, and lower resistance potential, supporting its rational, stewardship-aligned use to optimize treatment outcomes and help mitigate antimicrobial resistance globally.

Micek ST, Vazquez Guillamet MC, Reynolds D, Matuszak S, Kolodziej L, Kollef MH, et al. Optimal antibiotic use in the intensive care unit. Crit Care. 2025 Oct 14;29:434. doi:10.1186/s13054-025-05653-8

  • Summary: This review emphasizes the critical importance of optimizing antibiotic use in the ICU to improve patient outcomes while minimizing the emergence of antimicrobial resistance, advocating for timely, evidence-based treatment guided by local pathogen data, PK/PD-informed dosing, microbiologic testing, biomarkers, combination regimens, and stewardship programs involving a multidisciplinary team, with regular review and updates—potentially enhanced by AI/ML—to ensure sustainable, effective ICU antibiotic practices.

Geng S, Tang Q, Shi N. Antibiotic-sparing strategies for multidrug-resistant organism (MDRO) infections. Front Pharmacol. 2025 Sep 29;16:1653424. doi:10.3389/fphar.2025.1653424

  • Summary: This review addresses the escalating threat of multidrug-resistant organisms (MDROs) in ICUs, highlighting high mortality rates and the limitations of conventional antibiotics, and synthesizes innovative “antibiotic-sparing” strategies including non-antibiotic therapies such as bacteriophages, monoclonal antibodies, and nanotechnology-enhanced antimicrobial peptides, alongside antimicrobial stewardship with rapid diagnostics and PK/PD-guided dosing, and transmission prevention measures like UV-C disinfection and microbiota modulation, emphasizing that these combined approaches reduce antibiotic reliance, mitigate resistance evolution, and represent a paradigm shift toward precision infection control in the post-antibiotic era.

Aoki W, Uwamino Y, Kubota H, Kamoshita Y, Inose R, Nagata M, et al. Evaluation of in vitro efficacy of aztreonam-nacubactam and cefepime-nacubactam against clinical isolates of Stenotrophomonas maltophilia. Antimicrob Agents Chemother. 2025 Sep 22; doi:10.1128/aac.00755-25

  • Summary: This study demonstrates that combining β-lactam antibiotics with nacubactam (NAC) significantly enhances in vitro activity against Stenotrophomonas maltophilia blood culture isolates, with aztreonam-NAC reducing MICs by a median 32-fold and cefepime-NAC by 8-fold compared to monotherapy, suggesting that β-lactam–NAC combinations represent promising alternatives for treating this multidrug-resistant pathogen and warrant further in vivo investigation.

Smith HJ, Modlin C. CARB your enthusiasm: an ethics-informed analysis for clinicians of the US National Action Plan for combating antibiotic-resistant bacteria. Clin Infect Dis. 2025 Oct 16; doi:10.1093/cid/ciaf478

  • Summary: This paper provides an ethics-informed analysis of the 2020–2025 US National Action Plan for Combating Antibiotic-Resistant Bacteria (CARB), emphasizing its One Health approach and global relevance, while highlighting the need for greater consideration of clinicians’ prescribing practices and values, and enhanced transparency and input from infectious disease clinicians to improve the plan’s effectiveness in guiding responsible antibiotic use.

Kimbrough JH, Karr MH, Nguyen ST, DeJonge BLM, Longshaw C, Takemura M, et al. Activity of cefiderocol against Pseudomonas aeruginosa from the USA and Europe (2020–2023) with difficult-to-treat resistance phenotype, including those nonsusceptible to recently developed β-lactam/β-lactamase inhibitor combinations: results from the SENTRY antimicrobial surveillance program. Microbiol Spectr. 2025 Oct 13; doi:10.1128/spectrum.02079-25

  • Summary: This study evaluates the activity of cefiderocol compared with three IDSA-recommended β-lactam/β-lactamase inhibitor (BL-BLI) combinations—ceftazidime-avibactam, imipenem-relebactam, and ceftolozane-tazobactam—against difficult-to-treat resistance (DTR) Pseudomonas aeruginosa collected from the USA and Europe (2020–2023), demonstrating that cefiderocol retained high activity (≥95% susceptibility) even against isolates with carbapenemases or BL-BLI nonsusceptible phenotypes, whereas the BL-BLI combinations showed limited activity and high cross-resistance, supporting cefiderocol as a preferred first-line option for DTR P. aeruginosa infections.

Sevilla P, Martínez A, Pérez-Olaso O, Camarena JJ. Efficacy and safety of tedizolid in the treatment of acute bacterial skin and skin-structure infections: a systematic review and meta-analysis of randomised controlled trials. Clin Microbiol Infect. 2025 Oct 15; doi:10.1016/j.cmi.2025.10.007

  • Summary: This systematic review of six RCTs including 2,277 patients found that tedizolid is as effective as standard antibiotics for treating acute bacterial skin and skin-structure infections (ABSSSIs) in terms of early clinical response, end-of-treatment response, and microbiological eradication. Tedizolid demonstrated comparable overall adverse effects but had a lower risk of thrombocytopenia, neutropenia, and gastrointestinal disorders. Its once-daily dosing and shorter treatment duration make it a safe and convenient alternative, particularly for hematological patients.

Phage Therapy

Gaborieau B, Delattre R, Adiba S, Clermont O, Denamur E, Ricard JD, et al. Variable fitness effects of bacteriophage resistance mutations in Escherichia coli: implications for phage therapy. J Virol. 2024 Aug 30; doi:10.1128/jvi.01113-24

  • Summary: This study investigated phage resistance in extra-intestinal pathogenic Escherichia coli 536 exposed to a single virulent phage under both in vitro and in vivo conditions. Genome sequencing revealed convergent mutations targeting the K15 capsule and lipopolysaccharide (LPS), representing phage-nonspecific and phage-specific resistance mechanisms, respectively. While in vitro fitness tests could not differentiate the mutants, in vivo assays showed that LPS mutants were significantly attenuated in virulence, whereas K15 capsule mutants retained wild-type virulence. Resistance via receptor masking did not consistently confer cross-resistance to other phages. These findings highlight the importance of using diverse phage cocktails in therapy to effectively target both wild-type and phage-resistant bacterial clones.

Subedi D, Gordillo Altamirano F, Deehan R, Perera A, Patwa R, Kostoulias X, et al. Rational design of a hospital-specific phage cocktail to treat Enterobacter cloacae complex infections. Nat Microbiol. 2025 Sep 24; doi:10.1038/s41564-025-02130-4

  • Summary: The Alfred Hospital in Melbourne developed a therapeutic phage cocktail, Entelli-02, to address an ongoing outbreak of multidrug-resistant Enterobacter cloacae complex (ECC) infections. Starting with a 3-phage cocktail covering 54% of ECC isolates, the team improved efficacy through phage adaptation and targeted isolation, ultimately creating a 5-phage cocktail targeting distinct bacterial receptors. Entelli-02 demonstrates 88% coverage of the hospital’s ECC collection (n=206) and achieves >99% bacterial load reduction in septicemic mice. Produced as a therapeutic-grade product, Entelli-02 provides frontline, hospital-specific phage therapy with on-demand clinical availability.

Aldeia C, Campos-Madueno EI, Endimiani A. A commercial bacteriophage cocktail failed to decolonize Zophobas morio larvae and promoted overgrowth of an OXA-48-producing Salmonella enterica. Eur J Clin Microbiol Infect Dis. 2025 Oct 23; doi:10.1007/s10096-025-05275-6

  • Summary: This study used Zophobas morio larvae as a novel in vivo model to investigate intestinal colonization by an OXA-48-producing Salmonella enterica ST198 strain and found that treatment with the commercial INTESTI bacteriophage cocktail not only failed to decolonize the pathogen but actually promoted its overgrowth, highlighting the need for further research into the therapeutic potential and safety of broad-spectrum bacteriophage cocktails for controlling intestinal infections with hyper-epidemic S. enterica clones.

Bacterial Infections

Darwitz BP, Genito CJ, Thurlow LR. Triple threat: how diabetes results in worsened bacterial infections. Infect Immun. 2024 Mar 25;92(9): doi:10.1128/iai.00509-23

  • Summary: Diabetes mellitus increases the risk and severity of bacterial infections due to a “triple threat”: elevated tissue glucose that fuels bacterial growth and virulence, diabetes-induced immune dysfunction impairing phagocyte activity and oxidative killing, and higher likelihood of antibiotic treatment failure. Hyperglycemia promotes biofilm formation and metabolic interactions among polymicrobial communities, particularly in diabetic foot infections, while impaired insulin signaling disrupts neutrophil migration, cytokine responses, and oxidative bursts. These factors collectively exacerbate infection chronicity and may drive the emergence of multidrug-resistant bacterial strains.

Halder G, Chaudhury BN, Mandal S, Denny P, Sarkar D, Chakraborty M, et al. Whole genome sequence-based molecular characterization of blood isolates of carbapenem-resistant Enterobacter cloacae complex from ICU patients in Kolkata, India, during 2017–2022: emergence of phylogenetically heterogeneous Enterobacter hormaechei subsp. xiangfangensis. Microbiol Spectr. 2024 Feb 22;12(4): doi:10.1128/spectrum.03529-23

  • Summary: Blood-borne infections caused by carbapenem-resistant Enterobacter cloacae complex (CR-ECC) in Kolkata, India, are genetically diverse and exhibit multiple antimicrobial resistance mechanisms. Enterobacter hormaechei subsp. xiangfangensis (47%) emerged as the predominant subspecies. Key resistance genes included blaNDM-1 (51%) and blaCTX-M-15 (27%), alongside several other carbapenemase and ESBL genes not previously reported in India. Novel Class 1 integrons and diverse plasmid replicons were implicated in AMR dissemination. Non-carbapenemase resistance was linked to ampC overexpression, acrAB upregulation, and ompF loss. Thirty sequence types were identified, including five novel STs, and pulsed-field gel electrophoresis revealed high heterogeneity, suggesting multiple human reservoirs. These findings highlight the need for vigilant monitoring of CR-ECC to prevent AMR spread.

Sabour S, Harrington KRV, Martinson E, Bhatnagar AS, Huang JY, Duffy D, et al. Characterization of carbapenem-resistant Enterobacterales and Pseudomonas aeruginosa carrying multiple carbapenemase genes—Antimicrobial Resistance Laboratory Network, 2018–2022. J Clin Microbiol. 2024 Nov 20;62(12): doi:10.1128/jcm.01220-24

  • Summary: Carbapenem-resistant Enterobacterales (CRE) and Pseudomonas aeruginosa (CRPA) harboring multiple carbapenemase genes (MCP) are emerging public health threats in the U.S. From 2018–2022, 1% of CRE (611/79,799) and a small proportion of CRPA (31/54,490) were MCP, most commonly carrying blaKPC/blaNDM in CRE and blaVIM/blaIMP in CRPA. MCP isolates were more likely to be meropenem-resistant than single-carbapenemase or non-carbapenemase isolates. The frequency of MCP-CRE increased from 1% in 2018 to 3% in 2022. These findings, based on over 130,000 isolates, emphasize the need for continued monitoring and rapid detection to guide clinical management and contain the spread of highly resistant organisms.

Musumeci S, Grant R, Sobel J, Cherkaoui A, Buetti N, Harbarth S. Impact of discontinuation of contact precautions on healthcare-associated ESBL-producing Escherichia coli in a large tertiary care hospital: an interrupted time-series analysis. Clin Infect Dis. 2025 Oct 29; doi:10.1093/cid/ciaf594

  • Summary: At Geneva University Hospitals, stopping contact precautions for ESBL-producing Escherichia coli in 2019 did not lead to a significant increase in hospital-associated cases. Analysis of 2,336 cases from 2016–2024 showed a baseline incidence of 3.1 per 10,000 patient-days, with no significant change after discontinuation, including when focusing only on clinical isolates.

Chaïbi K, Nagle S, Billard-Pomares T, Zahar JR, Roux D. Heteroresistance in Pseudomonas aeruginosa ventilator-associated pneumonia: a neglected hypothesis for a clinical impasse. Clin Microbiol Infect. 2025 Oct 29; doi:10.1016/j.cmi.2025.10.018

  • Summary: Ventilator-associated pneumonia (VAP) is a major challenge in ICUs, with Pseudomonas aeruginosa being a particularly problematic pathogen. Its intrinsic and acquired antibiotic resistance complicates treatment, often causing clinical failure despite microbiologically appropriate and targeted therapy.

Sharara SL, Simner PJ, Bergman Y, Jacobs E, Fiawoo S, Klein EY, et al. Investigating the molecular epidemiology of extended-spectrum β-lactamase-producing Enterobacterales (ESBL-E) among patients admitted to the intensive care unit. Open Forum Infect Dis. 2025 Oct 21;12(10):ofaf590. doi:10.1093/ofid/ofaf590

  • Summary: In a US hospital ICU, 5% of patients were colonized with ESBL-producing Enterobacterales, mostly Escherichia coli or Klebsiella pneumoniae. Only 53% of third-generation cephalosporin-resistant isolates actually carried ESBL genes, highlighting limitations of using phenotypic resistance as a surrogate, especially for non-E. coli/K. pneumoniae species.

Bousfield R, Kappeler R, Pai S, Allen O, Randall K, Keane J, et al. Retrospective cohort study of Gram-negative bacteraemia shows transmission of hypervirulent Klebsiella pneumoniae in a UK intensive care unit during the Covid-19 pandemic. Infect Prev Pract. 2025 Oct 20;100492. doi:10.1016/j.infpip.2025.100492

  • Summary: During the COVID-19 pandemic, an ICU in the UK observed an increase in Gram-negative bloodstream infections, particularly Klebsiella spp. Among 41 isolates sequenced, 20% of E. coli and Klebsiella carried ESBL or AmpC genes, and a single Pseudomonas monteilli carried IMP-1. Notably, half of K. pneumoniae BSIs were hypervirulent (K2/K57 capsule types, iuc, iro, Rmp genes), and at least 19% of Klebsiella BSIs were likely due to patient-to-patient transmission. Risk factors included shared equipment, environmental contamination, and hand hygiene lapses. The study highlights the emerging threat of hypervirulent K. pneumoniae and emphasizes strict infection control measures, enhanced cleaning, and national surveillance to prevent transmission in ICU settings.

Dessemon J, Vacheron CH, Savey A, Machut A, Friggeri A, Prevot C, et al. The impact of carbapenem-resistant infections in intensive care units: focus on non-fermenting gram-negative bacilli and survival analysis. Antimicrob Resist Infect Control. 2025 Oct 21;14:127. doi:10.1186/s13756-025-01641-3

  • Summary: In a French ICU cohort (2016–2022), carbapenem-resistant non-fermenting Gram-negative bacilli (CR Nf-GNB) infections were associated with significantly higher 30-day mortality (sHR 1.57) and increased reinfection rates (sHR 1.23) compared to carbapenem-susceptible strains, though relapse rates were similar. CR infections also more frequently led to reinfections with multidrug-resistant organisms. These results highlight the critical need for targeted infection control and novel therapeutic strategies in ICUs to address CR Nf-GNB infections.

Liu J, Dong X, Xiang Y, Li Y, Yu Y, Wu T, et al. Stenotrophomonas muris—first discovered as a potential human pathogen with strong virulence and antibiotic resistance, associated with bloodstream infections. Microbiol Spectr. 2025 Sep 23; doi:10.1128/spectrum.02770-24

  • Summary: Stenotrophomonas muris is identified as a potential human pathogen with higher virulence and distinct antibiotic resistance compared to S. maltophilia. Key virulence genes and host responses were characterized, highlighting the need to distinguish S. muris in clinical settings for appropriate treatment.

Fu Y, Wang Y, Yao B, Zhou H, He J. Molecular epidemiology of clinical carbapenem-resistant Citrobacter spp in China (2016–24). Lancet Microbe. 2025 Sep 23; doi:10.1016/j.lanmic.2025.101250

  • Summary: A multicenter study in China (2016–2024) analyzed 379 Citrobacter isolates, including 47 carbapenem-resistant Citrobacter (CRC). Most CRC were C. freundii and carried diverse carbapenemases, mainly NDM-1/NDM-5. At least 17 sequence types were identified, with no high-risk ST22 clone detected. Limited clonal transmission was observed, and strains were highly resistant to β-lactams but generally susceptible to colistin. The study highlights the genetic diversity of CRC and emphasizes the need for enhanced surveillance.

Dokal K, Channon-Wells S, Davis C, Estrada-Rivadeneyra D, Huse KK, Lias A, et al. Immunity to Streptococcus pyogenes and common respiratory viruses at age 0 to 4 years after COVID-19 restrictions. JAMA Netw Open. 2025 Oct 15;8(10):doi:10.1001/jamanetworkopen.2025.37808

  • Summary: A cross-sectional study of 1,942 children in 10 European countries found that after COVID-19 nonpharmaceutical interventions (NPIs), children aged 3–4 years had significantly lower antibody levels to Streptococcus pyogenes and RSV compared with pre-pandemic peers, suggesting delayed acquisition of immunity. This immune gap may explain the rise in severe S. pyogenes infections in young children during 2022–2023.

Lefter CL, Poddi S, Rungatscher A. Endocarditis: rising incidence in the post-COVID-19 pandemic era: a narrative review. J Clin Med. 2025 Oct 15;14(20):7274. doi:10.3390/jcm14207274

  • Summary: Infective endocarditis (IE) incidence is rising in both elderly and young adults, with non-bacterial thrombotic endocarditis (NBTE) emerging as an underdiagnosed contributor. The COVID-19 pandemic has influenced IE epidemiology, complicating diagnosis and management. This narrative review discusses the factors driving increased IE rates, the role of NBTE, pandemic-related impacts, and evolving diagnostic challenges.

Reyes LF, Conway Morris A, Serrano-Mayorga C, Derde LPG, Dickson RP, Martin-Loeches I. Community-acquired pneumonia. Lancet. 2025 Oct 16; doi:10.1016/S0140-6736(25)01493-X

  • Summary: Community-acquired pneumonia affects vulnerable populations and can cause long-term complications. Rapid diagnostics and antibiotics guide treatment, while the role of adjunctive therapies remains unclear. Management focuses on personalized care, rehabilitation, cardiovascular monitoring, and vaccination to reduce disease burden.

Jain R, Yadav S, Bukke SPN, Chettupalli AK, Thalluri C. Post-operative infection treatment in cardiac surgery: current practices and future directions. Perioper Med. 2025 Oct 15;14:110. doi:10.1186/s13741-025-00580-2

  • Summary: Cardiac surgery patients face high risks of infections and complications, including mediastinitis, bloodstream infections, infective endocarditis, and CIED infections, all contributing to increased morbidity, mortality, and healthcare costs. Acute kidney injury and sepsis-induced cardiomyopathy further worsen outcomes. Advanced age, pre-existing conditions, and ESBL-producing organisms elevate risks, highlighting the need for vigilant management and further research.

Zaborskytė G, Hjort K, Lytsy B, Sandegren L. Parallel within-host evolution alters virulence factors in an opportunistic Klebsiella pneumoniae during a hospital outbreak. Nat Commun. 2025 Sep 30;16:8727. doi:10.1038/s41467-025-64521-9

  • Summary: A 5-year study of a multiresistant Klebsiella pneumoniae outbreak in 110 patients revealed rapid within-host evolution. Key virulence factors underwent strong selection, with convergent adaptations including reduced acute virulence, altered iron uptake, capsule and LPS changes, and enhanced biofilm formation, reflecting niche-specific adaptation and trade-offs that shape pathogen behavior over short timescales.

Gläser N, Schwab N, Pfeifer Y, Wahl A, Fischer MA, Osterloh A, et al. Fatal pneumocephalus caused by hypervirulent Klebsiella pneumoniae, Germany. Emerg Infect Dis. 2025;31(10):2008-2012. doi:10.3201/eid3110.250877

  • Summary: A fatal case of pneumocephalus in Germany was caused by hypervirulent Klebsiella pneumoniae ST23, confirmed by clinical, histopathologic, and genomic analyses. The patient had no travel history, indicating local emergence. This case highlights the unclear prevalence of hypervirulent K. pneumoniae in Europe and underscores the need for increased surveillance due to its global spread and severe, difficult-to-treat infections.

Aznar Fernández M, Rodríguez-Villodres Á, Gómez-Gómez MJ, Cisneros JM, Ortiz de la Rosa JM, Lepe JA. Novel KPC-2 plasmid in a clinical Salmonella Rissen selected by antibiotic pressure. J Infect Dis. 2025 Oct 17; doi:10.1093/infdis/jiaf536

  • Summary: A clinical Salmonella enterica Rissen isolate carried a novel IncN2 plasmid (pSEay-KPC) with blaKPC-2 and other resistance genes (blaACC-1, blaTEM-1, qnrB), conferring broad antimicrobial resistance. The pathogen survived ceftriaxone and ciprofloxacin treatments, with infection ultimately cleared by meropenem-vaborbactam. This highlights IncN2 plasmids as key vectors in spreading resistance and complicating treatment.

Crump JA, Mogeni P, Ajanovic SA, Bramugy JM, Chimenya M, Green EW, et al. Leptospirosis prevalence and risk factors among patients presenting with fever to 4 healthcare sites in sub-Saharan Africa and South East Asia: an international multisite observational and nested case–control study. J Infect Dis. 2025 Oct 16; doi:10.1093/infdis/jiaf464

  • Summary: In the FIEBRE study across Laos, Malawi, Mozambique, and Zimbabwe, 1.7% of 7,851 febrile patients had confirmed leptospirosis. Key risk factors included older age, working in rice fields, and drinking river water. Symptoms associated with infection included headache, rash, conjunctivitis, and jaundice. Predominant Leptospira serogroups were Ballum and Icterohemorrhagiae in Africa and Australis in Laos, with species including L. borgpetersenii, L. interrogans, and L. kirschneri. Targeted interventions could reduce disease risk.

Li HK, Zhu N, Waddell O, Coelho J, Daniel R, Guy RL, et al. Mortality among patients with invasive group A Streptococcus infections caused by the M1UK lineage: a retrospective cohort study in England and Wales. Clin Infect Dis. 2025 Oct 16; doi:10.1093/cid/ciaf492

  • Summary: In England and Wales, analysis of 4,952 emm1 invasive group A Streptococcus (iGAS) cases showed high overall mortality, with 30-day case fatality rates of 24.4% for M1UK and 22.3% for M1global lineages. Lineage was not a significant predictor of death after adjusting for age and sex. Most deaths occurred rapidly—over 60% within 1 day of diagnosis, and in children under 15, 95.6% of fatal cases occurred within a day. Findings highlight the urgent need for preventive measures and rapid diagnostics before culture confirmation.

Georgakopoulou T, Tsiodras S. Diphtheria outbreak among migrants in Europe. N Engl J Med. 2025 Oct 8;393:1444-1445. doi:10.1056/NEJMc2510099

  • Summary: A letter to the editor highlights methodological limitations in Hoefer et al.’s study on a diphtheria outbreak among European migrants. PCR was performed only on bacterial cultures, potentially missing cases with low bacterial load or prior antibiotic exposure, which could underestimate disease prevalence. The authors suggest combining direct PCR on clinical specimens with culture to improve detection and note the study did not assess asymptomatic carriers among contacts, peers, or staff.

Van Prehn J, Kuijper EJ, Dubberke ER. Recurrent Clostridioides difficile infections. JAMA. 2025 Oct 20; doi:10.1001/jama.2025.18089

  • Summary: Clostridioides difficile is a spore-forming, toxin-producing bacterium that can colonize the gut after ingestion of spores. In healthy individuals, gut microbiota and immune defenses usually prevent infection, but disruption—often from antibiotics—can lead to overgrowth and toxin-mediated damage to the colon. Symptoms range from mild diarrhea to severe colitis, with about 6% of cases requiring ICU care and 2% resulting in death.

Chevalier FJ, Bacon O, Johnson KA, Cohen SE. Syphilis: a review. JAMA. 2025 Oct 16; doi:10.1001/jama.2025.17362

  • Summary: Syphilis, caused by the spirochete Treponema pallidum, remains a growing global and US public health issue, with substantial increases in adult and congenital cases. It is transmitted sexually or vertically during pregnancy. Early infection presents as painless lesions or rash, while late stages can cause serious complications, including neurosyphilis. Diagnosis relies on serology and clinical history, and first-line treatment is intramuscular benzathine penicillin G. Prevention strategies include routine screening of sexually active individuals and pregnant patients, counseling on condom use, and doxycycline postexposure prophylaxis for high-risk groups.

Mycobacterial Infections

Shimamura M, Becken B, Tansmore J, Cristinziano M, Abad L, Dedrick RM, et al. Successful treatment of macrolide-resistant Mycobacterium abscessus infection using multi-drug regimens including dual β-lactams and phage therapy: case reports in two children. ASM Case Rep. 2025 Jun 12;1(5). doi:10.1128/asmcr.00087-24

  • Summary: Macrolide-resistant Mycobacterium abscessus infections in children are difficult to treat, but successful clinical and microbiologic clearance can be achieved using multi-drug regimens. Treatments may include clofazimine, bedaquiline, linezolid or eravacycline, dual β-lactam therapy, and in some cases, phage therapy. Therapeutic drug monitoring helps manage drug-related toxicities.

Saluzzo F, Yerlikaya S, Dorman SE, Eisenach K, Farhat MR, Ismail N, et al. Future-proofing tuberculosis therapy: framework for concurrent drug and resistance testing development. Lancet Infect Dis. 2025 Oct 23. doi:10.1016/S1473-3099(25)00547-X

  • Summary: The emergence of resistance to new tuberculosis drugs like bedaquiline threatens the success of modern all-oral regimens for drug-resistant TB. A key challenge is the lag in developing reliable tools to detect such resistance, hindering treatment and surveillance. The authors propose integrating drug susceptibility testing into all stages of TB drug development, supported by partnerships among researchers, diagnostic companies, regulators, and funders. A coordinated framework for data sharing, genomic analysis, and diagnostic innovation is needed to ensure resistance detection keeps pace with new drug development and safeguards future TB treatments.

Spies R, Crook DW, Peto TEA, Fowler PW, Turner R, Thai H, et al. Evaluating 12 automated, whole-genome sequencing analysis pipelines for Mycobacterium tuberculosis complex: a comparative study. Lancet Microbe. 2025 Oct 21. doi:10.1016/j.lanmic.2025.101210

  • Summary: This study evaluated publicly available automated whole-genome sequencing (WGS) pipelines for Mycobacterium tuberculosis to identify practical options for low- and middle-income countries. Of 28 identified pipelines, 12 were functional and free to use, with most showing comparable accuracy in drug resistance prediction, lineage classification, and genomic relatedness. However, scalability and accessibility were limited by factors like the need for strong computational infrastructure or manual data uploads. Since analytical accuracy was similar across platforms, factors such as usability, cost, privacy, and scalability may guide selection in high-burden settings to promote equitable access to WGS-based tuberculosis diagnostics and surveillance.

Wijk M, Denti P, Gausi K, Myers B, Carney T, White LF, et al. Insights into the role of rifampicin exposure and clinical baseline covariates on the response to pulmonary tuberculosis treatment. Clin Infect Dis. 2025 Oct 24. doi:10.1093/cid/ciaf586

  • Summary: This study from South Africa found that higher plasma exposure to rifampicin was linked to faster bacterial clearance and better treatment outcomes in patients with drug-susceptible tuberculosis, underscoring the importance of optimizing rifampicin levels to improve treatment success and prevent failure.

Mulenga H, Shenje J, Mendelsohn SC, Luabeya AKK, Tameris M, Tredoux EN, et al. Asymptomatic tuberculosis in children with household exposure to Mycobacterium tuberculosis. Clin Infect Dis. 2025 Oct 15. doi:10.1093/cid/ciaf562

  • Summary: In a South African study of 430 TB-exposed children aged 2–60 months, 36% of TB cases were asymptomatic—including 81% of microbiologically confirmed cases—and chest radiography frequently detected TB in these children, highlighting the importance of actively screening all child household contacts for TB to guide curative or preventive treatment regardless of symptoms.

Fungal Infections

Apostolopoulou A, Kampouri E, Little JS. The changing epidemiology of invasive mold diseases in immunosuppressed patients: what, why, how? Clin Microbiol Infect. 2025 Oct 29. doi:10.1016/j.cmi.2025.10.021

  • Summary: This review highlights the evolving epidemiology of invasive mold infections, emphasizing the impact of environmental changes, emerging antifungal resistance, and an expanding population of immunocompromised patients, and underscores the need for timely diagnosis, tailored management, and informed health policy and research strategies.

Vanbiervliet Y, Aerts R, Maessen L, Wauters J, Maertens J, Lagrou K. Laboratory innovations to diagnose invasive mould infections - what is relevant, what is not? Clin Microbiol Infect. 2025 Oct 29. doi:10.1016/j.cmi.2025.10.017

  • Summary: This narrative review summarizes recent innovations in diagnosing invasive mold infections (IMIs), highlighting advances such as rapid lateral-flow and chemiluminescent immunoassays for Aspergillus antigens, targeted PCRs for Aspergillus and Mucorales, and metagenomic next-generation sequencing, while noting that host-response assays remain investigational and emphasizing the need for multimodal, non-invasive, and standardized diagnostic approaches to enable earlier, more accurate detection and improve patient outcomes.

Martin-Loeches I, Cornely OA, Denning DW, Guinea J, Bassetti M, Maertens J, et al. Invasive candidiasis in intensive care medicine: shaping the future of diagnosis and therapy. Intensive Care Med. 2025 Oct 21. doi:10.1007/s00134-025-08151-1

  • Summary: This multidisciplinary narrative review highlights the evolving landscape of invasive candidiasis (IC) in critically ill patients, emphasizing that despite novel antifungal agents, optimal outcomes rely on timely and accurate diagnosis, individualized therapy, and antifungal stewardship, with non-culture diagnostics (β-D-glucan, molecular assays) providing faster detection but limited predictive value, and underscores the need for integrated, team-based approaches to improve care and mitigate antifungal resistance in ICU settings.

Bhattarai N, Stevens RW, Wieruszewski PM, Ilges D, Robinson JC, Cole KC, et al. Posaconazole enteral tube administration in adults: pharmacokinetic target attainment of oral suspension compared with crushed delayed-release tablet. J Antimicrob Chemother. 2025 Oct 22. doi:10.1093/jac/dkaf396

  • Summary: This retrospective cohort study found that in hospitalized adults receiving enteral feeding tube (EFT) administration, crushed posaconazole delayed-release (DR) tablets achieved therapeutic drug concentrations significantly more often than immediate-release (IR) suspension (80% vs 39%), though crushed DR tablets were associated with higher rates of tube occlusion, highlighting their potential as a more effective alternative to IR suspension while underscoring the need for optimized administration techniques to minimize complications.

Mendoza-Palomar N, Simó Nebot S, Roig-Soria L, Alonso García L, Izquierdo Anto C, Taida García Ascaso M, et al. Real-life use of isavuconazole in Spanish children and adolescents. J Antimicrob Chemother. 2025 Oct 22. doi:10.1093/jac/dkaf394

  • Summary: This multicentre retrospective study in 107 children (≤18 years) receiving isavuconazole (ISA) for invasive fungal disease or prophylaxis found that ISA was generally safe and effective, particularly as a second-line therapy after toxicity from other antifungals, with 60% of proven/probable cases responding favorably and no breakthrough infections in prophylaxis, though 25% experienced adverse effects and 59% of therapeutic drug monitoring (Ctrough) values were outside the target range, highlighting the importance of monitoring drug levels in paediatric patients.

Hérault A, Nicolas J, Demailly Z, Tamion F, Vodovar D. Retrospective analysis of pharmacological therapeutic monitoring of caspofungin in patients undergoing continuous renal replacement therapy using polyacrylonitrile membranes. J Antimicrob Chemother. 2025 Oct 22. doi:10.1093/jac/dkaf390

  • Summary: This monocentric retrospective study investigated caspofungin pharmacokinetics in ICU patients undergoing continuous renal replacement therapy (CRRT) with polyacrylonitrile membranes, prompted by concerns that these membranes may adsorb caspofungin and cause underdosing, and collected data on patient demographics, CRRT characteristics, caspofungin dosing, residual plasma concentrations, and ICU outcomes to evaluate potential impacts on drug exposure and safety.

Lee TC, Albuquerque AM, McDonald EG. Contextualizing the use of corticosteroids in severe Pneumocystis jirovecii pneumonia through a Bayesian lens. Clin Microbiol Commun. 2025 Oct 12;105141. doi:10.1016/j.cmicom.2025.105141

  • Summary: A Bayesian meta-analysis integrating HIV and non-HIV trials found that corticosteroids significantly reduce 28-day mortality in patients with severe Pneumocystis pneumonia (PCP), supporting their use in patients without HIV who have no strong contraindications.

De Kroon RR, Kreulen IAM, Davids M, van Thiel IAM, Admiraal I, Verdoes X, et al. The gut as a source of infection for fungal pathogens: increased fecal Candida albicans precedes onset of Candida late-onset sepsis in very preterm infants. J Infect Dis. 2025 Oct 10;jiaf524. doi:10.1093/infdis/jiaf524

  • Summary: In very preterm infants, increased fecal Candida albicans abundance and reduced bacterial diversity were observed up to five days before late-onset Candida sepsis, suggesting the preterm gut as a potential source of infection and highlighting the role of microbiota alterations in disease development.

Li H, Sun H, Hang Y. Diffuse reversible leukoencephalopathy in intracranial Aspergillus infection. JAMA Neurol. 2025 Oct 20. doi:10.1001/jamaneurol.2025.3927

  • Summary: A 36-year-old man with a history of two recent cerebral infarctions in the corpus callosum and brachium pontis, which resolved rapidly, presented with dizziness, unsteady gait, and confusion, alongside a left axillary fungal abscess that developed after incision and drainage but was not treated with antifungal therapy.

Barker KS, Zhang Q, Peters TL, Rybak JM, Morschhäuser J, Cuomo CA, et al. Relative contributions of the ERG11VF125AL and MRR1AN647T mutations to fluconazole resistance in Clade III Candidozyma (Candida) auris clinical isolates. Clin Microbiol Infect. 2025 Oct 17. doi:10.1016/j.cmi.2025.10.009

  • Summary: This study investigated antifungal resistance mechanisms in Clade III Candida auris and found that the ERG11 VF125AL mutation is the primary driver of fluconazole and voriconazole resistance, while the MRR1A N647T mutation contributes modestly, and both mutations do not affect susceptibility to itraconazole, isavuconazole, or posaconazole, highlighting alternative therapeutic options for Clade III infections.

Halliday C, Alguacil-Cuéllar L, Chen SC-A, Alastruey-Izquierdo A. Optimizing antifungal therapies for Candida infections: evidence, resistance, and emerging approaches. Clin Microbiol Infect. 2025 Oct 16; doi:10.1016/j.cmi.2025.10.008

  • Summary: This review highlights the growing challenge of antifungal resistance in Candida species, driven by mechanisms such as efflux pump overexpression, target mutations, biofilm formation, phenotypic switching, and genomic plasticity, and discusses emerging therapeutic strategies including novel antifungals (rezafungin, ibrexafungerp, fosmanogepix) and combination therapies, emphasizing the need for optimized treatment approaches, robust antifungal stewardship, and enhanced resistance surveillance.

Bouvier A, Durand A, Dupont V, Gower N, Castilla Lorente C, Campidelli A, et al. Invasive fungal infections after CD19 CAR T-cell therapy for B-cell lymphoma: a LYSA study from the DESCAR-T Registry. Clin Microbiol Infect. 2025 Oct 16; doi:10.1016/j.cmi.2025.10.005

  • Summary: A multicenter study of 1,012 adults with relapsed or refractory B-cell lymphoma treated with CD19 CAR T-cell therapy from the French DESCAR-T registry found that 3.1% developed invasive fungal infections (IFIs), primarily invasive aspergillosis and candidemia, with a high IFI-related mortality of 21.8%; risk factors included advanced age, multiple prior therapies, prior allogeneic transplantation, anti-IL-1 receptor antagonist treatment, and preceding bacterial infections, highlighting the need for individualized prophylaxis and rapid diagnosis in high-risk patients.

 

Diagnostics

Baum A, Miller JL, Gavaghan V, Beck ET, Argotsinger J. Effect of biofire blood culture identification 2 (BCID2) panel versus a matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) rapid incubation protocol on time to optimal therapy in patients with positive blood cultures. BMC Infect Dis. 2025 Sep 29;25:1208. doi:10.1186/s12879-025-11354-y

  • Summary: A multicenter retrospective study comparing rapid diagnostic methods for bloodstream infections found that the BioFire® BCID2 Panel significantly reduced time to optimal antimicrobial therapy (TTOT) to 21.1 hours versus 41.1 hours with a rapid-incubation MALDI-TOF MS protocol, with improvements observed for both gram-negative and gram-positive bacteremia, while time to effective therapy, hospital length of stay, and clinical failure were not significantly different, highlighting the BCID2 Panel’s potential to accelerate targeted treatment in patients with positive blood cultures.

Caruana G, Kritikos A, Vocat A, Tagini F, Delfino A, Luraschi A, et al. Nanomotion-based technology for rapid antibiotic susceptibility testing among adult patients admitted to a tertiary-care hospital with Gram-negative bacteremia: a prospective, single arm, comparative diagnostic accuracy study. Clin Microbiol Infect. 2025 Oct 29; doi:10.1016/j.cmi.2025.10.016

  • Summary: A prospective study evaluating the Resistell Phenotech antimicrobial susceptibility testing (AST) device, which uses nanomotion technology, in 253 adult patients with E. coli or K. pneumoniae bacteremia demonstrated high sensitivity (up to 100% for ceftriaxone) and specificity, while providing results over 10 hours faster than conventional methods (averaging 15.7 hours from positive blood culture to AST results), though performance for ciprofloxacin was lower, highlighting the device’s potential for rapid AST and the need for further development including multi-channel capability and enhanced detection of high-dose susceptibility.

Claeys KC, Prinzi AM, Timbrook TT. Beyond accuracy: methodological advances for assessing the clinical impact of infectious disease diagnostics. Open Forum Infect Dis. 2025 Oct;12(Suppl_2):S1391–S1403. doi:10.1093/ofid/ofaf489

  • Summary: This review discusses the complexity of evaluating in vitro diagnostic tests (IVDs) for infectious diseases, emphasizing that their clinical impact depends on context, implementation, and provider behavior, and highlights methodological challenges such as bias and inadequacies of traditional trial designs, while presenting novel analytical frameworks and study designs—including target trial frameworks, Benefit–Risk Evaluation of Diagnostics, and hybrid effectiveness–implementation approaches—that enable holistic, real-world assessment to better inform clinical decisions, policy, and patient outcomes.

Eickhoff MJ, Brown AP, Muenks CE, Porter ML, Ali M, Uddin I, et al. Evaluation of expert rules for carbapenemase class identification in Enterobacterales isolates using the VITEK2 susceptibility testing platform. J Clin Microbiol. 2025 Sep 19;63(10). doi:10.1128/jcm.00769-25

  • Summary: This study evaluates the performance of the bioMérieux Advanced Reporting Tool (bioART) combined with the VITEK2 Advanced Expert System for rapidly identifying carbapenemase classes in carbapenem-resistant Enterobacterales (CP-CRE), demonstrating that the combined approach improves detection sensitivity (96%) compared to AES alone (83%) and allows accurate identification of KPC, MBL, and OXA-48-like enzymes in clinical isolates, highlighting its potential utility in guiding timely confirmatory testing, informing antimicrobial therapy, and supporting infection control efforts in healthcare settings.

Huang P, Liao Y, Chen F, Wu H, Liu P. Metagenomic sequencing of blood culture broth for diagnosing fastidious endocarditis. Clin Infect Dis. 2025 Oct 13; ciaf554. doi:10.1093/cid/ciaf554

  • Summary: This letter highlights the practical integration of metagenomic next-generation sequencing (mNGS) with conventional microbiology in evaluating culture-negative cardiovascular infections, illustrating through a case of definite infective endocarditis how judicious use of microbial cell-free DNA testing and complementary specimen strategies can enhance real-world diagnostic decision-making.

Improving Clinical Trials

Ranzani OT, Singer M, Salluh JIF, Shankar-Hari M, Pilcher D, Berger-Estilita J, et al. Development and validation of the Sequential Organ Failure Assessment (SOFA)-2 score. JAMA. 2025 Oct 29; doi:10.1001/jama.2025.20516

  • Summary: The SOFA-2 score is an updated version of the widely used Sequential Organ Failure Assessment that incorporates contemporary organ support treatments, revised thresholds, and new variables to better describe organ dysfunction and predict ICU mortality in a diverse cohort of 3.3 million critically ill adults, demonstrating improved predictive validity over the original SOFA score while maintaining reliability across sequential ICU days, though gastrointestinal and immune dysfunction were not included due to insufficient data.
  • Editorial:
    Seymour CW. A revision to organ failure assessment in critically ill patients. JAMA. 2025 Oct 29; doi:10.1001/jama.2025.20255

Myburgh JA, Venkatesh B. A tribute to Rinaldo Bellomo: Why randomised behaviour is better than random behaviour. Crit Care Resusc. 2025 Sep;27(3):100123. doi:10.1016/j.ccrj.2025.100123

  • Summary: Under Rinaldo Bellomo, the ANZICS Clinical Trials Group conducted landmark ICU trials—including the Dopamine, SAFE, Crystalloid vs Hydroxyethyl Starch, RENAL, and ARISE studies—that rigorously addressed clinical uncertainty, advanced trial methodology, and generated evidence transforming global critical care practice.

Webb SA, Higgins AM. Rinaldo Bellomo and the ‘Dark Arts’ of clinical trials. Crit Care Resusc. 2025 Sep;27(3):100146. doi:10.1016/j.ccrj.2025.100146

  • Summary: Rinaldo Bellomo exemplified both the technical and strategic “Dark Arts” of clinical trial leadership, generously teaching researchers worldwide how to design rigorous trials, secure funding, collaborate, mentor, and prioritize patient-centered outcomes, leaving a lasting legacy through his formal ‘Dark Arts’ courses and his emphasis on integrity, perseverance, and science as a moral obligation.

Iba T, Ferrer R, Klompas M. Re-evaluating the impact of ventilator-associated events on mortality in critically ill patients: insights from advanced causal modeling. Intensive Care Med. 2025 Oct 6; doi:10.1007/s00134-025-08150-2

  • Summary: Nakahashi et al. conducted a robust, multicenter study using marginal structural modeling with time-varying covariates to rigorously evaluate ventilator-associated events (VAEs) in mechanically ventilated patients, demonstrating that VAEs are independent complications—not merely markers of baseline illness severity—associated with increased mortality, longer ICU stays, and delayed ventilator liberation, with findings strengthened by prospective daily data collection, inclusion of 18 Japanese ICUs, and stratification by COVID-19 status.

Daltro-Oliveira R, Quintairos A, Santos LIO, Amado F, Salluh JIF, Nassar AP Jr. Global disparities in scientific publications: A 5-year analysis of 10 critical care journals. Crit Care Resusc. 2025 Dec;27(4):100137. doi:10.1016/j.ccrj.2025.100137

  • Summary: This bibliometric analysis of 4,982 original research articles from the 10 highest-impact intensive care journals (2018–2022) revealed a stark global imbalance, with nearly 90% of studies originating from high-income countries (HICs) and minimal representation from low- and middle-income countries (LMICs/LICs); while randomized trials and public funding were relatively more common in UMICs and LMICs, structural barriers, limited funding, and potential publication bias contribute to underrepresentation, highlighting the need for equitable collaborations and inclusive editorial practices.

Waite AAC, Peto L, Gordon AC, Horby P. Platform trials to assess therapeutics in patients hospitalized with influenza. J Infect Dis. 2025 Oct 15;232(Suppl_3):S254–S261. doi:10.1093/infdis/jiaf276

  • Summary: Traditional randomized trials have struggled to identify effective treatments for hospitalized influenza patients due to small sample sizes and logistical challenges, but adaptive platform trials like REMAP-CAP and RECOVERY offer a transformative approach by simultaneously evaluating multiple antiviral and immunomodulatory therapies, adapting to emerging data, and enabling large-scale recruitment, highlighting the need for coordinated global platform trials to generate high-quality evidence, improve seasonal influenza management, and strengthen pandemic preparedness.

General Interest

GBD 2023 Demographics Collaborators. Global age-sex-specific all-cause mortality and life expectancy estimates for 204 countries and territories and 660 subnational locations, 1950–2023: a demographic analysis for the Global Burden of Disease Study 2023. Lancet. 2025 Oct 18;406(10513):1731–1810. doi:10.1016/S0140-6736(25)01330-3

  • Summary: The Global Burden of Disease Study 2023 provides comprehensive estimates of age- and sex-specific all-cause mortality and life expectancy across 204 countries, territories, and 660 subnational locations from 1950 to 2023, offering critical insights into long-term demographic trends and informing public health planning worldwide.

GBD 2023 Causes of Death Collaborators. Global burden of 292 causes of death in 204 countries and territories and 660 subnational locations, 1990–2023: a systematic analysis for the Global Burden of Disease Study 2023. Lancet. 2025 Oct 18;406(10513):1811–1872. doi:10.1016/S0140-6736(25)01917-8

  • Summary: The Global Burden of Disease Study 2023 (GBD 2023) provides detailed cause-specific mortality estimates for 292 causes across 204 countries, territories, and 660 subnational locations from 1990 to 2023, incorporating age, sex, and location to calculate death counts, rates, years of life lost (YLLs), probability of dying before age 70, and mean age at death, using advanced modelling (CODEm) and 55,761 data sources, while addressing COVID-19 misclassification and enhancing methodological accuracy to inform global health policy and resource allocation.

GBD 2023 Disease and Injury and Risk Factor Collaborators. Burden of 375 diseases and injuries, risk-attributable burden of 88 risk factors, and healthy life expectancy in 204 countries and territories, including 660 subnational locations, 1990–2023: a systematic analysis for the Global Burden of Disease Study 2023. Lancet. 2025 Oct 18;406(10513):1873–1922. doi:10.1016/S0140-6736(25)01637-X

  • Summary: The Global Burden of Disease Study 2023 (GBD 2023) provides a comprehensive assessment of health loss from 375 diseases and injuries and 88 modifiable risk factors worldwide, estimating years lived with disability (YLDs), years of life lost (YLLs), and disability-adjusted life-years (DALYs) using over 310,000 data sources and advanced modelling (DisMod-MR 2.1 and comparative risk assessment), with results stratified by age, sex, location, and year from 1990–2023 to inform global public health priorities and highlight post-COVID-19 health challenges.

Wojcik MH, Larkin K, Cipicchio M, Doupnik A, Zhao C, Cech C, et al. Toward same-day genome sequencing in the critical care setting. N Engl J Med. 2025 Oct 15; doi:10.1056/NEJMc2512825

  • Summary: This correspondence reports a pilot study demonstrating the feasibility of same-day rapid genome sequencing in a neonatal intensive care unit using a novel sequencing-by-expansion platform, which produced variant reports in under 7 hours, highlighting a scalable approach that could support timely, genetically informed critical care decisions for infants.

Srikalyani S. Echoes of Resilience: Learning Empathy Amidst Uncertainty. Ann Intern Med. 2025 Oct 15; doi:10.7326/annals.2025.10.15

  • Summary: This reflective piece describes a third-year medical student’s encounter with a breast cancer survivor newly diagnosed with small cell lung cancer, highlighting the profound emotional challenges in patient care and the importance of empathy, presence, and silent support as essential components of healing beyond clinical interventions.

Selby NM, Bobot M. From acute to chronic: the long-term consequences of AKI in South and Southeast Asia. Intensive Care Med. 2025 Oct 13; doi:10.1007/s00134-025-08141-3

  • Summary: Acute kidney injury (AKI) in intensive care units is common and associated with poor short- and long-term outcomes, including chronic kidney disease, hospital readmission, recurrent AKI, cardiovascular events, and increased mortality, yet most existing evidence comes from retrospective studies in high-income countries and specialized settings, leaving significant gaps regarding the long-term sequelae and epidemiology of AKI in low- and middle-income countries, where factors such as comorbidities, healthcare access, and socioeconomic conditions may substantially influence outcomes.

Rodríguez-Baño J. On continuity and evolution – some thoughts as the new CMI Editor-in-Chief. Clin Microbiol Infect. 2025 Oct 15; doi:10.1016/j.cmi.2025.10.010

  • Summary: Starting January 1st as Editor-in-Chief of Clinical Microbiology and Infection (CMI), the author expresses both honor and humility, acknowledging the legacy of their predecessor, Prof. Leonard Leibovici, whose leadership elevated the journal to a top position in clinical microbiology and infectious diseases through high-quality publications and editorial content, and reflects on their own anticipation of the responsibilities and challenges ahead.

Veletzky L, Winkler S. Human East African Trypanosomiasis. N Engl J Med. 2025 Oct 22;393:1633. doi:10.1056/NEJMicm2506547

  • Summary: A 34-year-old man returning from a Zimbabwe safari was diagnosed with East African trypanosomiasis (sleeping sickness) after presenting with fever, weakness, and a crusted scalp lesion, confirmed by blood smear showing Trypanosoma brucei rhodesiense; initial treatment with intravenous pentamidine improved symptoms but did not clear parasitemia, and subsequent treatment with fexinidazole led to negative blood smears and full recovery after a 10-day course.

Kilinc-Balci FS, Yorio PL, Kahveci Z, Coby C. Disinfecting wipes and barrier resistance of protective clothing. JAMA Netw Open. 2025 Oct 24;8(10):e2539307. doi:10.1001/jamanetworkopen.2025.39307

  • Summary: This laboratory-based study evaluated the impact of quaternary ammonia–based disinfecting wipes, with and without alcohol, on the liquid barrier resistance (LBR) of nine types of protective clothing (gowns and coveralls) used by healthcare and laboratory workers, finding that wiping generally reduced hydrostatic resistance in most fabrics—especially microporous spunbond films—while laminated and poly-reinforced materials were largely unaffected, and that drying after wiping did not consistently restore resistance, highlighting important implications for the safety and reuse of personal protective equipment during shortages.

Olotu AA, Bick JA, Medley-Lane BS, Spaulding AC. Infection control in carceral facilities. Clin Infect Dis. 2025 Oct 21; doi:10.1093/cid/ciaf479

Barbieri R, Fumey J, Kabral H, Scheib CL, Signoli M, Costedoat C, et al. Paratyphoid fever and relapsing fever in 1812 Napoleon's devastated army. Curr Biol. 2025 Oct 24; doi:10.1016/j.cub.2025.09.047

  • Summary: Analysis of ancient DNA from the teeth of 13 French soldiers who died during Napoleon’s 1812 retreat from Russia revealed infections with Salmonella Paratyphi C, causing paratyphoid fever, and Borrelia recurrentis, responsible for relapsing fever, suggesting that these pathogens—rather than previously suspected typhus or trench fever—likely contributed to widespread illness and the catastrophic collapse of the Grande Armée.

Coccolini F, Kirkpatrick AW, Cremonini C, Sartelli M. Source control in intra-abdominal infections: What you need to know. J Trauma Acute Care Surg. 2025 Nov;99(5):669-678. doi:10.1097/TA.0000000000004654

  • Summary: Contemporary management of intra-abdominal sepsis (IAS) emphasizes that optimal source control (SC) extends beyond traditional surgical intervention to include minimally invasive and medical therapies, aiming not only to address anatomical breaches and contamination but also to limit systemic biomediators, bacterial toxins, and catabolites that drive multisystem organ failure, while therapy must be individualized based on patient pathophysiology, comorbidities, and preferences, recognizing that mortality often stems more from the body’s inflammatory response than the infection itself.

McGettigan B, Hernandez-Tejero M, Malhi H, Shah V. Immune dysfunction and infection risk in advanced liver disease. Rev Basic Clin Gastroenterol Hepatol. 2025 Jun;168(6):1085-1100. doi:10.1053/j.gastro.2024.08.046

  • Summary: Advanced liver diseases, including cirrhosis and severe alcohol-associated hepatitis, cause profound immune dysfunction—often termed “immune paralysis”—that increases susceptibility to microbial infections, precipitates decompensation and death, and arises from disrupted hepatocyte and intrahepatic immune cell regulation, loss of gut barrier integrity, microbial translocation, and functional defects in innate and adaptive immunity, highlighting both the pathogenic mechanisms and potential therapeutic targets to mitigate infection risk in these patients.

Sasaki A, Nakajima M, Shinozaki T, Sasabuchi Y, Ohbe H, Kaszynski RH, et al. Association between early administration of mucoactive agents and in-hospital mortality in patients with pneumonia requiring mechanical ventilation: a nationwide cohort study. J Intensive Care. 2025;13:57. doi:10.1186/s40560-025-00826-7

  • Summary: In patients with pneumonia requiring invasive mechanical ventilation, early administration of mucoactive agents—such as ambroxol, bromhexine, fudosteine, carbocisteine, or N-acetylcysteine—was associated with a modest but statistically significant reduction in in-hospital mortality, although it did not significantly affect ventilator-free days, suggesting potential benefits of early mucoactive therapy in critically ill ventilated patients.

Eryılmaz Eren E, Mert D, Eser F, Senbayrak S, Kalın G, Karlıdag GE, et al. Epidemiology of ventilator associated events in intubated patients: a multicenter observational study. BMC Infect Dis. 2025;25:1363. doi:10.1186/s12879-025-11341-3

  • Summary: In a multicenter observational study of 1,018 mechanically ventilated patients, ventilator-associated events (VAE) were common and strongly associated with mortality, with risk factors including high SOFA scores on admission, tracheostomy, and recent antibiotic use, highlighting that VAE prevention is critical for improving survival in critically ill intubated patients.

Wu W, Tan J. Nasal leech. N Engl J Med. 2025 Oct 25;393:e28. doi:10.1056/NEJMicm2509569

  • Summary: A previously healthy 38-year-old man developed persistent unilateral epistaxis and blood-tinged mucus after mountain climbing and washing his face with spring water, and nasal endoscopy revealed a leech in his right nasal passage, which was successfully removed with topical anesthesia and suction, illustrating that nasal leech infestation—though rare—should be considered in patients with unilateral nosebleeds and exposure to untreated natural water sources.
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